Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903723.1_cds_XP_016453851.1_47937
CDS Infomation

[gene=LOC107778160] [db_xref=GeneID:107778160] [protein=AP-3 complex subunit delta-like] [protein_id=XP_016453851.1] [location=complement(33724..36639)] [gbkey=CDS]
Sequence

ATGGCCGGTCCGTCTCTTCTCGAATCTCTCTTCCAGCGATCTTTAGAAGACTTAATCAAA
GGCCTCCGTCTCTACGTCGGCGACGAATCAACCTTCATCTCCAAAGCCGTCGACGAGATC
CGCCGCGAAATCAAGTCCACCGATCAGCAGACAAAAGCCACCGCCCTTCAGAAACTTACC
TACTTGCACTCAATTCATGGCGTCGACATGTCGTGGGCTGCTTTTCACGCTATAGAACTC
TCTTCCTCTCAGTCTTTCAATTTTAAACGCATTGCTTATCTCGCCGCTTCTCTTTCCTTC
GATCCTTCCACTACTGACGTCATCCTCCTGCTGACTCATCAGCTTCGCAAGGACCTCTCG
TCTCCTAATCCACACGAAGTAAGCCTCGCTCTTCACACTCTTTATTTCATTTCGACCGCT
GATTTAGCACGTGATTTAACTCCTGAGGTATTCACTTTACTGAATAGTAACAAAGGTTCT
ACTAGGAAAAAAGCTATTGCTATTATTTTGAGACTATTCGAGTTATATCCAGATGCGGTT
AGGGTTTGTTTTAAGAGATTAATTGAAAATTTGGAGAATTCTGATCCCGCTATTGTATCT
GCTGTTGTTGGTGTTTTTTGTGAGCTTGCTAGCAAAGAACCGAAATCTTATCTCCCGTTA
GCACCCGAATTTTATAAGATATTGGTTGATTCGCGGAATAATTGGCTGTTGATTAAAGTT
CTGAAGATTTTTGTGAAGTTGGCTCCATTGGAGCCGAGGTTGGGGAAAAGGCTGGTGGAG
CCAATCTGCGAACATTTGAGGAGAACGGGTGCAAAGTCATTGTCTTTTGAATGCGTGAGG
ACTATTGTTAGTAGTTTCAGTGAGTATGACTCTGCTGTGAAGCTTTCTGTTGAGAAGATT
AGGGAGTTTTTGAATGATGATGATCCGAATCTCAAGTATCTTGGTTTGCAAGCACTTACC
ATTGTTGCGCCTAAGCATTTGTGGCCAGTTATAGAGAATAAGGATTTTGTGATTAAATCG
TTAAGTGATGCGGATGCAAATATTAAACTTGAGGCCTTGCAGCTTGTCATGGCCATGGTT
TCCGAGGATAATGTGGCGGAAATTTGCAGGGTTTTGATCAATTATGCTCTTAAGTCAGAC
CCAGAGTTTTGTAATGAAATTCTGGGGTGCATCTTGTTGACTTGTTCAAGGAATGTGTAT
GAGATAATTGTGGATTTTGATTGGTATGTATCACTTCTTGGGGAAATGTCGAGAATTCTG
CACTGTCAGAAGGGGGAGGAGATAGAGAACCAGCTTGCGGATATAGGTATGAGAGTCAAA
GATGCAAGACCAGAACTTGTTCGAGTTGGCCGTGATTTGCTAATTGATCCTGCATTGCTT
GGCAATCCTTTCATACATCCGATTTTATCAGCAGCTGCTTGGGTGTCAGGGGAGTATGTT
CGATTTTCCAAAAACCCATTGGAAATTATGGAAGCACTGTTGCAACCAAGAACCAGTTTA
TTGCCGCCATCAATAAAAGCAGTATATATCCAGTCTGCATTTAAAGTACTTACCTTTTAT
CTGCATTATGCTATTTCTACCAAGGAAGTTATTTCTTCAGCTTCCCAAGGAGTGGCAGAT
ATAATGCATGGAGCAGTACAAGAGAATTCTCAGTTTGTAAGAGCTGGATTTGTTGCTGAA
AGTGACTCAGATGACGGGGGTTTGAGTCACAGGATGATGTTACATCGACCTGTTAGGGAT
ATTTCAGTAGAGAGTTTTGAGGATATGGCTGTTGCTCGTGACTGGTTGTCCTCAACCTCC
TTCAAGGGGGAGCCAATCACTGAAGAATCTATTGTTAACATATTAAATCTTGTAGAAACA
ACGCTGGGACCACTAGCAGGAAGCCATGGGGTGGAGATACTGGAGAGGTCAAGAAATGTC
CTTGGTTTGGTTGAATTGGTAAGAGAAGAATTACCTGGTTACTTGGTGAAAAGGGAAGAA
GATAATGACAAGGGACAAAGGAACACTCATGAAATGATCAAATTAATTGCTGAAGCCTTT
TCTGAAGAGCTTGGTCCAGTTTCAGCAAGTTCTCAGGAAAGGGTACCAATACCTGAAGGA
ATGATGCTTAATCAAAGTCTGAATGATCTGGATGCCATATGTGGTGACTTTGAGTTGCAT
ATACCTACTTCTTTCTCCCTTGGAAGATCAATTTCCTCCGAAAAGGATGATGTTACCATG
TCTGATCGGCAAGGTAAGGAAGAATTTGAATCAACTGAATCAACATCTCTTCTTGCAGAG
CATCGCAAACGCCATGGGCTATACTATTTACAGTCACAGAAAAAGGAAACGATAAATGAT
GAATACCCACCTGCTAATGACCTCAAGACTGGAGAGAATGCTGATGACAAGGCTGATGAT
CTTATTAAGCTGACAGAACAATCTCTATTCCCTAAGAAAAAGACAAACCAGGCAAAGCCT
AGGCCTGTAGTAGTCAAACTGGATGATGGAGATGGACCTTTTATCCCCGCAAAGAAGGTA
GATTCCAAAGATGACTTAATCTCGGGTGCTGTGAGTGATGTTCTTTTCGGTGATGAAGCC
ACAGCATCATCATCAAGAACTAAGAAGTCTGACAAGTCATCTAGTAAGAGAAGACAGAAG
GACAAGTTAGATATAGACAAGTCTTCCGGACCAAAAGAGGATTCTAAATTTATGGAGAAT
TCTGAACTAGAAAATGCAAATTTGAGAAGAAGCAAACGCCATTCTCGTGGTAAAGAGAAG
AAACATAGAAGTAATGCAAAAGATAGAGATGAACATGAAGAGGGAGATAAGCAGAAGGTT
AGCCATCATCATGGCAAGCATAAATCCCGACAAAGGGCAGAAGGGGCTCTAACATTAGCA
GCACAATCACCTGTTATTCCTGATTTTCTTTTGTAG

Peptide Sequence

PEP ID

XP_016453851.1
PEP Infomation

PREDICTED: AP-3 complex subunit delta-like [Nicotiana tabacum]
Sequence

MAGPSLLESLFQRSLEDLIKGLRLYVGDESTFISKAVDEIRREIKSTDQQTKATALQKLT
YLHSIHGVDMSWAAFHAIELSSSQSFNFKRIAYLAASLSFDPSTTDVILLLTHQLRKDLS
SPNPHEVSLALHTLYFISTADLARDLTPEVFTLLNSNKGSTRKKAIAIILRLFELYPDAV
RVCFKRLIENLENSDPAIVSAVVGVFCELASKEPKSYLPLAPEFYKILVDSRNNWLLIKV
LKIFVKLAPLEPRLGKRLVEPICEHLRRTGAKSLSFECVRTIVSSFSEYDSAVKLSVEKI
REFLNDDDPNLKYLGLQALTIVAPKHLWPVIENKDFVIKSLSDADANIKLEALQLVMAMV
SEDNVAEICRVLINYALKSDPEFCNEILGCILLTCSRNVYEIIVDFDWYVSLLGEMSRIL
HCQKGEEIENQLADIGMRVKDARPELVRVGRDLLIDPALLGNPFIHPILSAAAWVSGEYV
RFSKNPLEIMEALLQPRTSLLPPSIKAVYIQSAFKVLTFYLHYAISTKEVISSASQGVAD
IMHGAVQENSQFVRAGFVAESDSDDGGLSHRMMLHRPVRDISVESFEDMAVARDWLSSTS
FKGEPITEESIVNILNLVETTLGPLAGSHGVEILERSRNVLGLVELVREELPGYLVKREE
DNDKGQRNTHEMIKLIAEAFSEELGPVSASSQERVPIPEGMMLNQSLNDLDAICGDFELH
IPTSFSLGRSISSEKDDVTMSDRQGKEEFESTESTSLLAEHRKRHGLYYLQSQKKETIND
EYPPANDLKTGENADDKADDLIKLTEQSLFPKKKTNQAKPRPVVVKLDDGDGPFIPAKKV
DSKDDLISGAVSDVLFGDEATASSSRTKKSDKSSSKRRQKDKLDIDKSSGPKEDSKFMEN
SELENANLRRSKRHSRGKEKKHRSNAKDRDEHEEGDKQKVSHHHGKHKSRQRAEGALTLA
AQSPVIPDFLL

Transcript Sequence

Gene sequence data has not been registered.